Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl esterase/lipase | SAMN04487898_107103 | Not Available | Negative | 2972735 - 2973622 | 32039.4 |
| peptide chain release factor 2 | SAMN04487898_107104 | Not Available | Negative | 2973649 - 2974512 | 32829.9 |
| hypothetical protein | SAMN04487898_107105 | Not Available | Negative | 2974806 - 2975309 | 17341.3 |
| glucose-6-phosphate isomerase | SAMN04487898_107106 | Not Available | Positive | 2975473 - 2977119 | 61464.9 |
| protein of unknown function | SAMN04487898_107107 | Not Available | Positive | 2977294 - 2977833 | 19849.8 |
| glutamine cyclotransferase | SAMN04487898_107108 | Not Available | Negative | 2977882 - 2978973 | 40212.0 |
| putative endonuclease | SAMN04487898_107109 | Not Available | Negative | 2978954 - 2979316 | 13932.3 |
| dna primase | SAMN04487898_107110 | Not Available | Negative | 2979319 - 2981307 | 74354.6 |
| lysophospholipase l1 | SAMN04487898_107111 | Not Available | Negative | 2981381 - 2982043 | 24104.6 |
| hypothetical protein | SAMN04487898_107112 | Not Available | Negative | 2982100 - 2983038 | 36248.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

