Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_10793 | Not Available | Negative | 2960288 - 2961502 | 46139.4 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN04487898_10794 | Not Available | Negative | 2961518 - 2962126 | 21971.1 |
| protein of unknown function | SAMN04487898_10795 | Not Available | Negative | 2962098 - 2962634 | 20025.1 |
| quinol:cytochrome c oxidoreductase quinone-binding subunit 1 | SAMN04487898_10796 | Not Available | Negative | 2962637 - 2964109 | 55702.3 |
| prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit | SAMN04487898_10797 | Not Available | Negative | 2964141 - 2967212 | 112692.0 |
| cytochrome c7 | SAMN04487898_10798 | Not Available | Negative | 2967259 - 2968554 | 47892.0 |
| homospermidine synthase (spermidine-specific) | SAMN04487898_10799 | Not Available | Negative | 2968808 - 2969788 | 36948.3 |
| hypothetical protein | SAMN04487898_107100 | Not Available | Positive | 2969805 - 2971034 | 46266.6 |
| predicted o-methyltransferase yrrm | SAMN04487898_107101 | Not Available | Negative | 2971052 - 2971852 | 30178.3 |
| regulator of sirc expression, contains transglutaminase-like and tpr domains | SAMN04487898_107102 | Not Available | Positive | 2971871 - 2972740 | 33682.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

