Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_10783 | Not Available | Negative | 2951785 - 2952033 | 8885.03 |
| putative membrane protein | SAMN04487898_10784 | Not Available | Negative | 2952072 - 2952605 | 19927.4 |
| protein sco1/2 | SAMN04487898_10785 | Not Available | Negative | 2952622 - 2953329 | 26851.3 |
| cytochrome c oxidase subunit iv | SAMN04487898_10786 | Not Available | Negative | 2953329 - 2953685 | 13647.1 |
| cytochrome c oxidase subunit 3 | SAMN04487898_10787 | Not Available | Negative | 2953706 - 2954413 | 26807.9 |
| cytochrome c oxidase subunit 3 | SAMN04487898_10788 | Not Available | Negative | 2954444 - 2955034 | 21706.0 |
| protoheme ix farnesyltransferase | SAMN04487898_10789 | Not Available | Negative | 2955042 - 2955920 | 32477.8 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN04487898_10790 | Not Available | Negative | 2955932 - 2956996 | 39648.5 |
| cytochrome c oxidase subunit 1 | SAMN04487898_10791 | Not Available | Negative | 2957086 - 2958969 | 70502.7 |
| cytochrome c oxidase subunit 2 | SAMN04487898_10792 | Not Available | Negative | 2958990 - 2960219 | 46119.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

