Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubia prenyltransferase family protein | SAMN04487898_10773 | Not Available | Positive | 2941554 - 2942444 | 33688.1 |
| two-component system, ompr family, response regulator mtra | SAMN04487898_10774 | Not Available | Negative | 2942441 - 2943130 | 26450.1 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN04487898_10775 | Not Available | Negative | 2943135 - 2944802 | 64053.4 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04487898_10776 | Not Available | Negative | 2944814 - 2946706 | 72545.5 |
| anaphase-promoting complex, cyclosome, subunit 3 | SAMN04487898_10777 | Not Available | Positive | 2947011 - 2948819 | 69152.1 |
| protein of unknown function | SAMN04487898_10778 | Not Available | Positive | 2948835 - 2949137 | 11536.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN04487898_10779 | Not Available | Positive | 2949144 - 2949698 | 21246.9 |
| chemotaxis protein motb | SAMN04487898_10780 | Not Available | Negative | 2949762 - 2950604 | 31560.1 |
| tigr02453 family protein | SAMN04487898_10781 | Not Available | Negative | 2950714 - 2951376 | 25586.7 |
| hypothetical protein | SAMN04487898_10782 | Not Available | Negative | 2951373 - 2951771 | 15208.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

