Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04487898_10763 | Not Available | Negative | 2928435 - 2929880 | 54151.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10764 | Not Available | Negative | 2929885 - 2933448 | 132010.0 |
| fecr family protein | SAMN04487898_10765 | Not Available | Negative | 2933791 - 2934918 | 41930.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_10766 | Not Available | Negative | 2934970 - 2935554 | 22640.6 |
| hypothetical protein | SAMN04487898_10767 | Not Available | Negative | 2935551 - 2935682 | 5517.87 |
| cupin-like domain-containing protein | SAMN04487898_10768 | Not Available | Positive | 2935700 - 2936581 | 34325.2 |
| cupin-like domain-containing protein | SAMN04487898_10769 | Not Available | Positive | 2936667 - 2937548 | 33526.6 |
| von willebrand factor type a domain-containing protein | SAMN04487898_10770 | Not Available | Positive | 2937631 - 2938728 | 41427.3 |
| magnesium chelatase subunit i | SAMN04487898_10771 | Not Available | Positive | 2938755 - 2940233 | 56388.1 |
| hypothetical protein | SAMN04487898_10772 | Not Available | Positive | 2940270 - 2941535 | 47651.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

