Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/galactose transporter | SAMN04487898_101199 | Not Available | Positive | 275896 - 277182 | 47575.0 |
| carbohydrate-binding family 9 | SAMN04487898_101200 | Not Available | Positive | 277220 - 277882 | 25235.9 |
| glycosyl hydrolases family 16 | SAMN04487898_101201 | Not Available | Positive | 278010 - 278795 | 28571.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_101202 | Not Available | Positive | 278954 - 282022 | 111651.0 |
| starch-binding associating with outer membrane | SAMN04487898_101203 | Not Available | Positive | 282027 - 283484 | 54256.4 |
| cadherin-like | SAMN04487898_101204 | Not Available | Positive | 283496 - 285004 | 54583.1 |
| glycosyl hydrolase family 20, catalytic domain | SAMN04487898_101205 | Not Available | Positive | 285096 - 286643 | 59039.0 |
| hexosaminidase | SAMN04487898_101206 | Not Available | Positive | 286676 - 289237 | 96017.6 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMN04487898_101207 | Not Available | Positive | 289238 - 290425 | 42539.4 |
| glucosamine-6-phosphate deaminase | SAMN04487898_101208 | Not Available | Positive | 290437 - 291198 | 28273.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

