Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04487898_10743 | Not Available | Negative | 2890915 - 2892378 | 54796.8 |
| signal transduction histidine kinase | SAMN04487898_10744 | Not Available | Negative | 2892520 - 2896638 | 156252.0 |
| lysophospholipase l1 | SAMN04487898_10745 | Not Available | Negative | 2896641 - 2897330 | 26111.9 |
| hypothetical protein | SAMN04487898_10746 | Not Available | Positive | 2897553 - 2897780 | 8311.71 |
| alpha-1,2-mannosidase, putative | SAMN04487898_10747 | Not Available | Negative | 2897959 - 2900034 | 77072.2 |
| phospholipase c | SAMN04487898_10748 | Not Available | Negative | 2900221 - 2902773 | 97038.8 |
| alpha-1,2-mannosidase, putative | SAMN04487898_10749 | Not Available | Positive | 2902946 - 2905201 | 85529.6 |
| beta-galactosidase/beta-glucuronidase | SAMN04487898_10750 | Not Available | Positive | 2905287 - 2908919 | 136948.0 |
| hypothetical protein | SAMN04487898_10751 | Not Available | Positive | 2909168 - 2911792 | 100162.0 |
| protein of unknown function | SAMN04487898_10752 | Not Available | Negative | 2911865 - 2912665 | 29038.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

