Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN04487898_10733 | Not Available | Positive | 2871958 - 2872539 | 22399.7 |
| aromatic amino acid transport protein arop | SAMN04487898_10734 | Not Available | Positive | 2872630 - 2874072 | 52940.9 |
| susd family protein | SAMN04487898_10735 | Not Available | Negative | 2874120 - 2875625 | 55869.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10736 | Not Available | Negative | 2875643 - 2878525 | 104773.0 |
| hypothetical protein | SAMN04487898_10737 | Not Available | Negative | 2878582 - 2879502 | 33373.9 |
| susd family protein | SAMN04487898_10738 | Not Available | Negative | 2879542 - 2881065 | 57294.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10739 | Not Available | Negative | 2881076 - 2884330 | 119110.0 |
| right handed beta helix region | SAMN04487898_10740 | Not Available | Negative | 2884616 - 2886748 | 79499.4 |
| cytochrome c | SAMN04487898_10741 | Not Available | Negative | 2886754 - 2889495 | 101111.0 |
| lysophospholipase l1 | SAMN04487898_10742 | Not Available | Negative | 2889612 - 2890904 | 47675.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

