Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dolichol-phosphate mannosyltransferase | SAMN04487898_10713 | Not Available | Negative | 2840682 - 2841626 | 36348.4 |
| protein of unknown function | SAMN04487898_10714 | Not Available | Negative | 2841610 - 2842770 | 44057.9 |
| sulfate permease, sulp family | SAMN04487898_10715 | Not Available | Negative | 2842886 - 2844424 | 55232.3 |
| hypothetical protein | SAMN04487898_10716 | Not Available | Positive | 2844580 - 2845299 | 26753.4 |
| hypothetical protein | SAMN04487898_10717 | Not Available | Positive | 2845306 - 2845617 | 11409.2 |
| aspartyl protease | SAMN04487898_10718 | Not Available | Negative | 2845575 - 2846501 | 33422.5 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_10719 | Not Available | Negative | 2846502 - 2847890 | 51746.2 |
| pkd-like family protein | SAMN04487898_10720 | Not Available | Negative | 2847910 - 2849430 | 56730.1 |
| protein of unknown function | SAMN04487898_10721 | Not Available | Negative | 2849456 - 2850220 | 28933.2 |
| susd family protein | SAMN04487898_10722 | Not Available | Negative | 2850254 - 2851687 | 53675.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

