Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04487898_1073 | Not Available | Negative | 2829407 - 2830207 | 27647.4 |
| hypothetical protein | SAMN04487898_1074 | Not Available | Positive | 2830370 - 2830666 | 11377.3 |
| hypothetical protein | SAMN04487898_1075 | Not Available | Positive | 2830713 - 2831522 | 29748.5 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04487898_1076 | Not Available | Positive | 2831534 - 2832208 | 26081.6 |
| signal transduction histidine kinase | SAMN04487898_1077 | Not Available | Positive | 2832210 - 2833526 | 50546.2 |
| cu2+-exporting atpase | SAMN04487898_1078 | Not Available | Negative | 2833548 - 2835881 | 83644.1 |
| multicopper oxidase with three cupredoxin domains (includes cell division protein ftsp and spore coat protein cota) | SAMN04487898_1079 | Not Available | Negative | 2835900 - 2838140 | 85852.6 |
| protein of unknown function | SAMN04487898_10710 | Not Available | Negative | 2838314 - 2838802 | 17883.6 |
| hypothetical protein | SAMN04487898_10711 | Not Available | Negative | 2838908 - 2839303 | 14840.0 |
| protein of unknown function | SAMN04487898_10712 | Not Available | Negative | 2839909 - 2840682 | 30000.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

