Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN04487898_106310 | Not Available | Negative | 2821291 - 2821905 | 23611.5 |
| hypothetical protein | SAMN04487898_106311 | Not Available | Negative | 2821925 - 2822332 | 15198.0 |
| helix-turn-helix domain-containing protein | SAMN04487898_106312 | Not Available | Negative | 2822414 - 2823316 | 34973.7 |
| superfamily i dna and/or rna helicase | SAMN04487898_106313 | Not Available | Negative | 2823370 - 2826138 | 105982.0 |
| hypothetical protein | SAMN04487898_106314 | Not Available | Positive | 2826154 - 2826816 | 25714.0 |
| hypothetical protein | SAMN04487898_106315 | Not Available | Positive | 2826821 - 2827525 | 26916.3 |
| hypothetical protein | SAMN04487898_106316 | Not Available | Positive | 2827533 - 2827994 | 17559.5 |
| uncharacterized conserved protein ybcv, duf1398 family | SAMN04487898_106317 | Not Available | Negative | 2828074 - 2828476 | 15273.1 |
| transposase dde domain-containing protein | SAMN04487898_1071 | Not Available | Positive | 2828477 - 2828632 | 5888.33 |
| hypothetical protein | SAMN04487898_1072 | Not Available | Negative | 2828837 - 2829352 | 19561.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

