Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04487898_106300 | Not Available | Positive | 2807443 - 2809011 | 58561.2 |
| signal transduction histidine kinase | SAMN04487898_106301 | Not Available | Negative | 2809098 - 2813255 | 157600.0 |
| tpr repeat | SAMN04487898_106302 | Not Available | Negative | 2813409 - 2815607 | 83924.1 |
| hypothetical protein | SAMN04487898_106303 | Not Available | Negative | 2815665 - 2816633 | 37030.3 |
| hypothetical protein | SAMN04487898_106304 | Not Available | Negative | 2816715 - 2817281 | 21480.7 |
| hypothetical protein | SAMN04487898_106305 | Not Available | Positive | 2817365 - 2818777 | 54650.3 |
| fic/doc family protein | SAMN04487898_106306 | Not Available | Negative | 2818809 - 2819606 | 30585.6 |
| hypothetical protein | SAMN04487898_106307 | Not Available | Negative | 2819752 - 2819982 | 8871.38 |
| tpr repeat-containing protein | SAMN04487898_106308 | Not Available | Negative | 2820117 - 2820638 | 20029.8 |
| hypothetical protein | SAMN04487898_106309 | Not Available | Positive | 2820898 - 2821035 | 4967.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

