Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb superfamily protein | SAMN04487898_106290 | Not Available | Positive | 2791711 - 2792238 | 20380.3 |
| sialate o-acetylesterase | SAMN04487898_106291 | Not Available | Positive | 2792386 - 2793795 | 51568.5 |
| two component transcriptional regulator, lyttr family | SAMN04487898_106292 | Not Available | Negative | 2793815 - 2794522 | 27390.9 |
| hypothetical protein | SAMN04487898_106293 | Not Available | Positive | 2794749 - 2795237 | 18457.3 |
| iron complex outermembrane recepter protein | SAMN04487898_106294 | Not Available | Negative | 2795319 - 2797895 | 93361.1 |
| hypothetical protein | SAMN04487898_106295 | Not Available | Negative | 2798301 - 2799182 | 33523.1 |
| hypothetical protein | SAMN04487898_106296 | Not Available | Negative | 2799207 - 2799731 | 19922.5 |
| hypothetical protein | SAMN04487898_106297 | Not Available | Positive | 2800028 - 2802127 | 75758.5 |
| sialate o-acetylesterase | SAMN04487898_106298 | Not Available | Positive | 2802142 - 2804082 | 71622.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_106299 | Not Available | Positive | 2804305 - 2807424 | 111924.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

