Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chondroitin ac lyase | SAMN04487898_101189 | Not Available | Positive | 262035 - 264110 | 77622.5 |
| glycosyl hydrolase family 88 | SAMN04487898_101190 | Not Available | Positive | 264144 - 265313 | 44778.1 |
| transcriptional regulator, laci family | SAMN04487898_101191 | Not Available | Negative | 265320 - 266369 | 39980.3 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN04487898_101192 | Not Available | Negative | 266461 - 267258 | 29907.5 |
| mfs transporter, acs family, hexuronate transporter | SAMN04487898_101193 | Not Available | Negative | 267263 - 268516 | 45599.2 |
| arac-type dna-binding protein | SAMN04487898_101194 | Not Available | Positive | 268682 - 269551 | 33408.0 |
| sugar phosphate isomerase/epimerase | SAMN04487898_101195 | Not Available | Positive | 269559 - 270383 | 31495.2 |
| protein of unknown function, duf608 | SAMN04487898_101196 | Not Available | Negative | 270372 - 272558 | 82001.6 |
| sialate o-acetylesterase | SAMN04487898_101197 | Not Available | Negative | 272585 - 274501 | 71238.3 |
| transcriptional regulator, laci family | SAMN04487898_101198 | Not Available | Positive | 274694 - 275755 | 40131.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

