Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock protein (beta-ribbon, cspa family) | SAMN04487898_106260 | Not Available | Negative | 2746424 - 2746615 | 7011.29 |
| hypothetical protein | SAMN04487898_106261 | Not Available | Positive | 2747187 - 2747672 | 17319.6 |
| parallel beta-helix repeat (two copies)/putative cofactor-binding repeat-containing protein | SAMN04487898_106262 | Not Available | Positive | 2747685 - 2749070 | 49145.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_106263 | Not Available | Positive | 2749215 - 2749802 | 22781.8 |
| fecr family protein | SAMN04487898_106264 | Not Available | Positive | 2749879 - 2751009 | 42076.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_106265 | Not Available | Positive | 2751132 - 2754728 | 131876.0 |
| starch-binding associating with outer membrane | SAMN04487898_106266 | Not Available | Positive | 2754743 - 2756530 | 66885.3 |
| fad dependent oxidoreductase | SAMN04487898_106267 | Not Available | Positive | 2756579 - 2758210 | 60469.9 |
| alpha-l-rhamnosidase | SAMN04487898_106268 | Not Available | Positive | 2758241 - 2760946 | 102294.0 |
| hypothetical protein | SAMN04487898_106269 | Not Available | Positive | 2760981 - 2762876 | 71845.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

