Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system atp-binding protein | SAMN04487898_106230 | Not Available | Positive | 2712587 - 2713375 | 28684.4 |
| cob(i)alamin adenosyltransferase | SAMN04487898_106231 | Not Available | Positive | 2713378 - 2713926 | 20840.4 |
| protein of unknown function | SAMN04487898_106232 | Not Available | Positive | 2714057 - 2714278 | 8587.66 |
| hypothetical protein | SAMN04487898_106233 | Not Available | Positive | 2714371 - 2714532 | 5678.53 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN04487898_106234 | Not Available | Negative | 2714533 - 2715216 | 25437.1 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN04487898_106235 | Not Available | Negative | 2715310 - 2716359 | 40048.1 |
| hypothetical protein | SAMN04487898_106236 | Not Available | Positive | 2716588 - 2717295 | 25056.2 |
| putative abc transport system permease protein | SAMN04487898_106237 | Not Available | Positive | 2717390 - 2718631 | 45557.5 |
| aspartate aminotransferase | SAMN04487898_106238 | Not Available | Negative | 2718711 - 2719904 | 43728.2 |
| cation diffusion facilitator family transporter | SAMN04487898_106239 | Not Available | Positive | 2720094 - 2721017 | 34476.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

