Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase components of abc transporters with duplicated atpase domains | SAMN04487898_106210 | Not Available | Negative | 2680393 - 2681991 | 60362.8 |
| hypothetical protein | SAMN04487898_106211 | Not Available | Positive | 2682018 - 2682206 | 7135.03 |
| l,d-transpeptidase catalytic domain | SAMN04487898_106212 | Not Available | Positive | 2682219 - 2683631 | 53651.8 |
| conserved repeat domain-containing protein/gliding motility-associated c-terminal domain-containing protein | SAMN04487898_106213 | Not Available | Positive | 2683997 - 2692921 | 312401.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04487898_106214 | Not Available | Positive | 2692925 - 2693923 | 36924.2 |
| protein tonb | SAMN04487898_106215 | Not Available | Positive | 2693995 - 2694846 | 31120.7 |
| modulator of drug activity b | SAMN04487898_106216 | Not Available | Negative | 2694884 - 2695573 | 26733.5 |
| dna-binding transcriptional regulator, lysr family | SAMN04487898_106217 | Not Available | Positive | 2695595 - 2696491 | 34405.4 |
| spore maturation protein spma | SAMN04487898_106218 | Not Available | Negative | 2696515 - 2697786 | 45348.9 |
| prolyl oligopeptidase family protein | SAMN04487898_106219 | Not Available | Negative | 2697849 - 2700701 | 107598.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

