Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04487898_106200 | Not Available | Positive | 2671441 - 2672319 | 30914.7 |
| choline dehydrogenase | SAMN04487898_106201 | Not Available | Positive | 2672458 - 2674194 | 63753.9 |
| gluconate 2-dehydrogenase subunit 3 | SAMN04487898_106202 | Not Available | Positive | 2674210 - 2674827 | 22935.5 |
| ergothioneine biosynthesis protein egtb | SAMN04487898_106203 | Not Available | Positive | 2674943 - 2676094 | 45045.1 |
| dimethylhistidine n-methyltransferase | SAMN04487898_106204 | Not Available | Positive | 2676103 - 2677074 | 36766.1 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN04487898_106205 | Not Available | Negative | 2677086 - 2677676 | 22487.3 |
| transcriptional regulator, tetr family | SAMN04487898_106206 | Not Available | Negative | 2677680 - 2678228 | 20884.2 |
| hypothetical protein | SAMN04487898_106207 | Not Available | Positive | 2678301 - 2678582 | 10293.3 |
| heparin lyase | SAMN04487898_106208 | Not Available | Positive | 2678687 - 2679841 | 43715.1 |
| hemoglobin | SAMN04487898_106209 | Not Available | Positive | 2679890 - 2680282 | 14795.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

