Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate cyclase | SAMN04487898_106190 | Not Available | Negative | 2660164 - 2661312 | 44038.0 |
| dihydrofolate reductase | SAMN04487898_106191 | Not Available | Negative | 2661309 - 2661860 | 20631.7 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN04487898_106192 | Not Available | Negative | 2661892 - 2663118 | 45480.1 |
| hypothetical protein | SAMN04487898_106193 | Not Available | Negative | 2663141 - 2663641 | 19017.0 |
| hypothetical protein | SAMN04487898_106194 | Not Available | Positive | 2663681 - 2664886 | 44512.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_106195 | Not Available | Positive | 2664962 - 2665561 | 23470.5 |
| fecr family protein | SAMN04487898_106196 | Not Available | Positive | 2665676 - 2666641 | 36693.2 |
| tonb-dependent receptor plug domain | SAMN04487898_106197 | Not Available | Positive | 2666811 - 2670158 | 126096.0 |
| hypothetical protein | SAMN04487898_106198 | Not Available | Positive | 2670169 - 2670996 | 31463.6 |
| transcriptional regulator, hxlr family | SAMN04487898_106199 | Not Available | Negative | 2671000 - 2671359 | 13537.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

