Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, hxlr family | SAMN04487898_106180 | Not Available | Positive | 2649837 - 2650223 | 14635.8 |
| snoal-like domain-containing protein | SAMN04487898_106181 | Not Available | Negative | 2650270 - 2650710 | 16745.9 |
| hypothetical protein | SAMN04487898_106182 | Not Available | Negative | 2650758 - 2651249 | 18517.3 |
| protein of unknown function | SAMN04487898_106183 | Not Available | Positive | 2651541 - 2654168 | 97177.9 |
| helix-turn-helix domain-containing protein | SAMN04487898_106184 | Not Available | Positive | 2654401 - 2655279 | 33631.7 |
| predicted arabinose efflux permease, mfs family | SAMN04487898_106185 | Not Available | Positive | 2655370 - 2656584 | 43442.9 |
| hypothetical protein | SAMN04487898_106186 | Not Available | Positive | 2656581 - 2657627 | 38639.4 |
| ribosomal protein s18 acetylase rimi | SAMN04487898_106187 | Not Available | Positive | 2657717 - 2658235 | 20158.6 |
| arac-type dna-binding protein | SAMN04487898_106188 | Not Available | Negative | 2658241 - 2659065 | 32144.1 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04487898_106189 | Not Available | Negative | 2659083 - 2660096 | 36672.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

