Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_101179 | Not Available | Positive | 246216 - 249287 | 111453.0 |
| starch-binding associating with outer membrane | SAMN04487898_101180 | Not Available | Positive | 249305 - 250903 | 59248.7 |
| carbohydrate-binding family 9 | SAMN04487898_101181 | Not Available | Positive | 250971 - 251684 | 27181.5 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMN04487898_101182 | Not Available | Positive | 251694 - 252878 | 42775.9 |
| glucosamine-6-phosphate deaminase | SAMN04487898_101183 | Not Available | Positive | 252875 - 253630 | 28349.6 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN04487898_101184 | Not Available | Positive | 253672 - 254487 | 30415.1 |
| sugar phosphate isomerase/epimerase | SAMN04487898_101185 | Not Available | Positive | 254491 - 255324 | 32351.3 |
| hypothetical protein | SAMN04487898_101186 | Not Available | Positive | 255335 - 258202 | 108740.0 |
| glycosyl hydrolases family 28 | SAMN04487898_101187 | Not Available | Positive | 258214 - 259680 | 54357.6 |
| alpha-1,2-mannosidase, putative | SAMN04487898_101188 | Not Available | Positive | 259719 - 262034 | 87536.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

