Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN04487898_106170 | Not Available | Positive | 2635947 - 2637167 | 45372.3 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMN04487898_106171 | Not Available | Positive | 2637170 - 2638360 | 43303.1 |
| transcriptional regulator, laci family | SAMN04487898_106172 | Not Available | Negative | 2638357 - 2639376 | 37614.8 |
| disulphide bond corrector protein dsbc | SAMN04487898_106173 | Not Available | Negative | 2639477 - 2639992 | 19041.3 |
| hypothetical protein | SAMN04487898_106174 | Not Available | Negative | 2639992 - 2641500 | 56446.9 |
| thioredoxin | SAMN04487898_106175 | Not Available | Negative | 2641502 - 2642653 | 42432.9 |
| susd family protein | SAMN04487898_106176 | Not Available | Negative | 2642657 - 2644090 | 53022.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_106177 | Not Available | Negative | 2644121 - 2647681 | 129256.0 |
| fecr family protein | SAMN04487898_106178 | Not Available | Negative | 2647876 - 2648985 | 41329.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_106179 | Not Available | Negative | 2649080 - 2649655 | 22197.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

