Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_106160 | Not Available | Positive | 2620994 - 2621758 | 29188.3 |
| hypothetical protein | SAMN04487898_106161 | Not Available | Negative | 2621821 - 2622651 | 30817.7 |
| lysophospholipase l1 | SAMN04487898_106162 | Not Available | Negative | 2622989 - 2623762 | 28849.8 |
| hypothetical protein | SAMN04487898_106163 | Not Available | Negative | 2623823 - 2623975 | 5680.71 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_106164 | Not Available | Positive | 2623977 - 2627219 | 118696.0 |
| starch-binding associating with outer membrane | SAMN04487898_106165 | Not Available | Positive | 2627237 - 2629006 | 66415.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04487898_106166 | Not Available | Positive | 2629011 - 2632082 | 110443.0 |
| glucosamine-6-phosphate deaminase | SAMN04487898_106167 | Not Available | Negative | 2632130 - 2632867 | 27266.6 |
| predicted dehydrogenase | SAMN04487898_106168 | Not Available | Negative | 2632956 - 2634383 | 53161.1 |
| glucose/galactose transporter | SAMN04487898_106169 | Not Available | Positive | 2634427 - 2635911 | 54395.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

