Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yarhg domain-containing protein | SAMN04487898_106120 | Not Available | Negative | 2562343 - 2562597 | 9858.08 |
| protein of unknown function | SAMN04487898_106121 | Not Available | Negative | 2562734 - 2563477 | 28857.2 |
| hypothetical protein | SAMN04487898_106122 | Not Available | Negative | 2563592 - 2564590 | 37297.6 |
| helix-turn-helix domain-containing protein | SAMN04487898_106123 | Not Available | Positive | 2564831 - 2565583 | 28603.2 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04487898_106124 | Not Available | Positive | 2565608 - 2566762 | 43779.9 |
| fad/fmn-containing dehydrogenase | SAMN04487898_106125 | Not Available | Negative | 2566845 - 2569781 | 109297.0 |
| aldehyde dehydrogenase (nad+) | SAMN04487898_106126 | Not Available | Negative | 2569791 - 2571320 | 54967.9 |
| protein of unknown function | SAMN04487898_106127 | Not Available | Negative | 2571335 - 2572240 | 34813.2 |
| saccharopine dehydrogenase, nadp-dependent | SAMN04487898_106128 | Not Available | Negative | 2572248 - 2573339 | 40125.4 |
| dna-binding transcriptional regulator, lysr family | SAMN04487898_106129 | Not Available | Positive | 2573386 - 2574282 | 33584.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

