Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 2557295 - 2557368 | Not Available |
| hypothetical protein | SAMN04487898_106111 | Not Available | Positive | 2557544 - 2557708 | 6480.89 |
| hypothetical protein | SAMN04487898_106112 | Not Available | Positive | 2557712 - 2558191 | 18748.6 |
| hypothetical protein | SAMN04487898_106113 | Not Available | Positive | 2558378 - 2558602 | 8580.85 |
| hypothetical protein | SAMN04487898_106114 | Not Available | Positive | 2558619 - 2559257 | 23691.5 |
| hypothetical protein | SAMN04487898_106115 | Not Available | Positive | 2559320 - 2559697 | 13553.1 |
| hypothetical protein | SAMN04487898_106116 | Not Available | Negative | 2559973 - 2560557 | 22950.3 |
| protein of unknown function | SAMN04487898_106117 | Not Available | Negative | 2560718 - 2561179 | 17916.4 |
| gad-like domain-containing protein | SAMN04487898_106118 | Not Available | Negative | 2561447 - 2561719 | 10686.6 |
| protein of unknown function, duf600 | SAMN04487898_106119 | Not Available | Negative | 2561720 - 2562067 | 13182.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

