Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN04487898_106100 | Not Available | Positive | 2550346 - 2551167 | 29694.8 |
| rna polymerase primary sigma factor | SAMN04487898_106101 | Not Available | Positive | 2551406 - 2552266 | 32608.5 |
| hypothetical protein | SAMN04487898_106102 | Not Available | Positive | 2552371 - 2552547 | 6386.66 |
| dna polymerase-4 | SAMN04487898_106103 | Not Available | Positive | 2552658 - 2553710 | 38981.9 |
| hypothetical protein | SAMN04487898_106104 | Not Available | Positive | 2553757 - 2553990 | 8898.63 |
| colicin import membrane protein | SAMN04487898_106105 | Not Available | Positive | 2554066 - 2554779 | 24368.2 |
| putative redox protein | SAMN04487898_106106 | Not Available | Positive | 2554857 - 2555258 | 14838.8 |
| response regulator receiver domain-containing protein | SAMN04487898_106107 | Not Available | Negative | 2555321 - 2555686 | 13324.5 |
| dna polymerase-3 subunit epsilon | SAMN04487898_106108 | Not Available | Positive | 2555838 - 2557208 | 51574.5 |
| hypothetical protein | SAMN04487898_106109 | Not Available | Negative | 2557218 - 2557262 | 1755.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

