Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| curved dna-binding protein | SAMN04487898_10690 | Not Available | Negative | 2533822 - 2534748 | 34225.4 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN04487898_10691 | Not Available | Negative | 2534831 - 2536102 | 46539.2 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04487898_10692 | Not Available | Positive | 2536188 - 2537570 | 51862.3 |
| heat repeat | SAMN04487898_10693 | Not Available | Positive | 2537619 - 2541047 | 123538.0 |
| hypothetical protein | SAMN04487898_10694 | Not Available | Positive | 2541059 - 2542486 | 53140.4 |
| predicted dehydrogenase | SAMN04487898_10695 | Not Available | Positive | 2542502 - 2543587 | 40031.5 |
| rna polymerase sigma factor, sigma-70 family | SAMN04487898_10696 | Not Available | Positive | 2543762 - 2544331 | 22015.6 |
| fecr family protein | SAMN04487898_10697 | Not Available | Positive | 2544386 - 2545408 | 38424.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10698 | Not Available | Positive | 2545564 - 2548749 | 117886.0 |
| starch-binding associating with outer membrane | SAMN04487898_10699 | Not Available | Positive | 2548760 - 2550343 | 60065.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

