Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent fmn reductase | SAMN04487898_10680 | Not Available | Positive | 2525863 - 2526399 | 19511.7 |
| d-lactate dehydrogenase | SAMN04487898_10681 | Not Available | Negative | 2526396 - 2527397 | 37067.9 |
| phospholipase/carboxylesterase | SAMN04487898_10682 | Not Available | Negative | 2527432 - 2528052 | 22351.9 |
| glyoxalase family protein | SAMN04487898_10683 | Not Available | Negative | 2528054 - 2528989 | 35222.7 |
| surface antigen | SAMN04487898_10684 | Not Available | Positive | 2529060 - 2531597 | 96378.1 |
| fatty acid hydroxylase superfamily protein | SAMN04487898_10685 | Not Available | Positive | 2531691 - 2532305 | 24111.7 |
| cytochrome c | SAMN04487898_10686 | Not Available | Positive | 2532373 - 2532732 | 12366.2 |
| hypothetical protein | SAMN04487898_10687 | Not Available | Negative | 2532799 - 2533296 | 18932.8 |
| hypothetical protein | SAMN04487898_10688 | Not Available | Negative | 2533286 - 2533453 | 6185.37 |
| merr hth family regulatory protein | SAMN04487898_10689 | Not Available | Negative | 2533520 - 2533810 | 11295.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

