Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmotically inducible protein osmc | SAMN04487898_101170 | Not Available | Positive | 236123 - 236542 | 14634.4 |
| conserved hypothetical protein (putative transposase or invertase) | SAMN04487898_101171 | Not Available | Negative | 236679 - 237572 | 34541.1 |
| predicted oxidoreductase | SAMN04487898_101172 | Not Available | Negative | 237853 - 238854 | 36623.9 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 239426 - 239506 | 18.01 |
| helix-turn-helix domain-containing protein | SAMN04487898_101173 | Not Available | Negative | 238946 - 239842 | 34119.6 |
| predicted oxidoreductase | SAMN04487898_101174 | Not Available | Positive | 240017 - 240988 | 35611.0 |
| arac-type dna-binding protein | SAMN04487898_101175 | Not Available | Positive | 241016 - 241825 | 30798.8 |
| hypothetical protein | SAMN04487898_101176 | Not Available | Positive | 242375 - 243022 | 23977.1 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN04487898_101177 | Not Available | Positive | 243269 - 244264 | 38651.7 |
| glucose/galactose transporter | SAMN04487898_101178 | Not Available | Positive | 244696 - 246057 | 50260.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

