Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_10670 | Not Available | Positive | 2516523 - 2516699 | 6944.56 |
| protein of unknown function | SAMN04487898_10671 | Not Available | Positive | 2516747 - 2517196 | 16782.3 |
| 6-phosphogluconolactonase | SAMN04487898_10672 | Not Available | Negative | 2517231 - 2517956 | 26937.2 |
| glucose-6-phosphate 1-dehydrogenase | SAMN04487898_10673 | Not Available | Negative | 2517956 - 2519467 | 57448.5 |
| 6-phosphogluconate dehydrogenase | SAMN04487898_10674 | Not Available | Negative | 2519479 - 2520894 | 52079.6 |
| polyphosphate glucokinase | SAMN04487898_10675 | Not Available | Negative | 2520898 - 2521662 | 28208.0 |
| protein of unknown function | SAMN04487898_10676 | Not Available | Positive | 2522232 - 2523029 | 30440.6 |
| arac-type dna-binding protein | SAMN04487898_10677 | Not Available | Positive | 2523337 - 2524320 | 37207.6 |
| arac-type dna-binding protein | SAMN04487898_10678 | Not Available | Positive | 2524324 - 2525328 | 37913.9 |
| cbs domain-containing protein | SAMN04487898_10679 | Not Available | Positive | 2525467 - 2525754 | 10728.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

