Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04487898_10660 | Not Available | Negative | 2506719 - 2508089 | 51883.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10661 | Not Available | Negative | 2508100 - 2511402 | 123188.0 |
| hypothetical protein | SAMN04487898_10662 | Not Available | Negative | 2511479 - 2511652 | 6644.97 |
| fecr family protein | SAMN04487898_10663 | Not Available | Negative | 2511624 - 2512739 | 40690.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_10664 | Not Available | Negative | 2512796 - 2513386 | 23314.5 |
| hypothetical protein | SAMN04487898_10665 | Not Available | Negative | 2513429 - 2513566 | 5167.35 |
| hypothetical protein | SAMN04487898_10666 | Not Available | Positive | 2514012 - 2514374 | 14104.3 |
| fecr family protein | SAMN04487898_10667 | Not Available | Negative | 2514429 - 2515658 | 45563.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_10668 | Not Available | Negative | 2515690 - 2516283 | 23213.2 |
| hypothetical protein | SAMN04487898_10669 | Not Available | Positive | 2516387 - 2516512 | 4759.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

