Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylamine utilisation protein maue | SAMN04487898_10650 | Not Available | Positive | 2499633 - 2500091 | 17474.5 |
| arac-type dna-binding protein | SAMN04487898_10651 | Not Available | Positive | 2500045 - 2501025 | 37367.5 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_10652 | Not Available | Positive | 2501184 - 2501834 | 25364.5 |
| hypothetical protein | SAMN04487898_10653 | Not Available | Positive | 2501939 - 2502298 | 14038.4 |
| methylamine utilisation protein maue | SAMN04487898_10654 | Not Available | Positive | 2502449 - 2502934 | 18346.4 |
| hypothetical protein | SAMN04487898_10655 | Not Available | Positive | 2503027 - 2503275 | 8756.31 |
| hypothetical protein | SAMN04487898_10656 | Not Available | Positive | 2503352 - 2504404 | 40678.4 |
| hypothetical protein | SAMN04487898_10657 | Not Available | Positive | 2504410 - 2504649 | 8847.63 |
| hypothetical protein | SAMN04487898_10658 | Not Available | Positive | 2504882 - 2505121 | 8593.15 |
| peroxiredoxin | SAMN04487898_10659 | Not Available | Negative | 2505171 - 2506691 | 57756.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

