Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted naringenin-chalcone synthase | SAMN04487898_10640 | Not Available | Negative | 2489224 - 2490312 | 40338.2 |
| methyltransferase domain-containing protein | SAMN04487898_10641 | Not Available | Negative | 2490273 - 2490989 | 27752.0 |
| dehydrogenase (flavoprotein) | SAMN04487898_10642 | Not Available | Negative | 2490983 - 2492140 | 43428.3 |
| hypothetical protein | SAMN04487898_10643 | Not Available | Positive | 2492282 - 2492665 | 15317.8 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04487898_10644 | Not Available | Negative | 2492645 - 2493628 | 36822.8 |
| conserved repeat domain-containing protein/gliding motility-associated c-terminal domain-containing protein | SAMN04487898_10645 | Not Available | Negative | 2493630 - 2494580 | 34349.9 |
| hypothetical protein | SAMN04487898_10646 | Not Available | Negative | 2494611 - 2495300 | 23943.5 |
| hypothetical protein | SAMN04487898_10647 | Not Available | Negative | 2495318 - 2496976 | 56676.8 |
| hypothetical protein | SAMN04487898_10648 | Not Available | Positive | 2497305 - 2497973 | 24956.6 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN04487898_10649 | Not Available | Negative | 2498000 - 2499466 | 55340.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

