Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_10630 | Not Available | Positive | 2478103 - 2478672 | 22139.0 |
| fecr family protein | SAMN04487898_10631 | Not Available | Positive | 2478741 - 2479931 | 44824.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10632 | Not Available | Positive | 2480007 - 2483387 | 125004.0 |
| susd family protein | SAMN04487898_10633 | Not Available | Positive | 2483404 - 2484828 | 53353.5 |
| protein of unknown function | SAMN04487898_10634 | Not Available | Positive | 2484832 - 2485596 | 28321.2 |
| thioredoxin-like | SAMN04487898_10635 | Not Available | Positive | 2485604 - 2486770 | 45677.3 |
| 4'-phosphopantetheinyl transferase superfamily protein | SAMN04487898_10636 | Not Available | Negative | 2486773 - 2487243 | 17687.2 |
| acyl carrier protein | SAMN04487898_10637 | Not Available | Negative | 2487230 - 2487493 | 9893.87 |
| 3-oxoacyl-(acyl-carrier-protein) synthase | SAMN04487898_10638 | Not Available | Negative | 2487495 - 2488763 | 44543.2 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | SAMN04487898_10639 | Not Available | Negative | 2488756 - 2489202 | 16110.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

