Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN04487898_10610 | Not Available | Positive | 2459356 - 2460213 | 33335.6 |
| hypothetical protein | SAMN04487898_10611 | Not Available | Negative | 2460363 - 2460959 | 23311.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_10612 | Not Available | Negative | 2460946 - 2461443 | 19551.4 |
| na+/h+-dicarboxylate symporter | SAMN04487898_10613 | Not Available | Positive | 2461591 - 2462976 | 50236.0 |
| hypothetical protein | SAMN04487898_10614 | Not Available | Positive | 2463020 - 2463544 | 20161.2 |
| hypothetical protein | SAMN04487898_10615 | Not Available | Positive | 2463498 - 2463620 | 4828.88 |
| lsu ribosomal protein l21p | SAMN04487898_10616 | Not Available | Positive | 2463627 - 2463938 | 11408.0 |
| large subunit ribosomal protein l27 | SAMN04487898_10617 | Not Available | Positive | 2463995 - 2464381 | 13530.4 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04487898_10618 | Not Available | Negative | 2464449 - 2464817 | 13957.6 |
| response regulator receiver domain-containing protein | SAMN04487898_10619 | Not Available | Positive | 2465025 - 2465987 | 36556.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

