Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function, duf255 | SAMN04487898_105296 | Not Available | Positive | 2427483 - 2428571 | 41022.0 |
| prolyl oligopeptidase family protein | SAMN04487898_105297 | Not Available | Positive | 2428564 - 2430900 | 88888.5 |
| Tmrna,resume consensus sequence (at 88): tataattggcgaaaataa | Not Available | Not Available | Positive | 2431028 - 2431391 | Not Available |
| aspartate aminotransferase | SAMN04487898_105299 | Not Available | Negative | 2431459 - 2432751 | 48037.0 |
| protein of unknown function | SAMN04487898_105300 | Not Available | Negative | 2432769 - 2433161 | 14049.1 |
| pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (e1) component | SAMN04487898_105301 | Not Available | Positive | 2433188 - 2435716 | 93807.8 |
| chorismate synthase | SAMN04487898_105302 | Not Available | Negative | 2435755 - 2436843 | 38765.1 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN04487898_105303 | Not Available | Negative | 2436872 - 2438128 | 45839.1 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN04487898_105304 | Not Available | Negative | 2438131 - 2439270 | 41724.6 |
| prephenate dehydratase | SAMN04487898_105305 | Not Available | Negative | 2439327 - 2440160 | 31668.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

