Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04487898_105276 | Not Available | Positive | 2395706 - 2396608 | 32688.7 |
| bnr repeat-containing family member | SAMN04487898_105277 | Not Available | Positive | 2396613 - 2397941 | 50221.9 |
| rhamnogalacturonyl hydrolase yesr | SAMN04487898_105278 | Not Available | Positive | 2397951 - 2399060 | 42208.2 |
| lysophospholipase l1 | SAMN04487898_105279 | Not Available | Positive | 2399125 - 2401161 | 75756.4 |
| hypothetical protein | SAMN04487898_105280 | Not Available | Positive | 2401169 - 2403034 | 69829.0 |
| dihydroflavonol-4-reductase | SAMN04487898_105281 | Not Available | Negative | 2403155 - 2404162 | 37064.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_105282 | Not Available | Negative | 2404227 - 2404802 | 22155.7 |
| arac-type dna-binding protein | SAMN04487898_105283 | Not Available | Negative | 2404983 - 2405852 | 33943.3 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN04487898_105284 | Not Available | Positive | 2406018 - 2408933 | 107728.0 |
| fucose permease | SAMN04487898_105285 | Not Available | Positive | 2408960 - 2410504 | 56016.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

