Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_105266 | Not Available | Negative | 2378963 - 2382535 | 132245.0 |
| fecr family protein | SAMN04487898_105267 | Not Available | Negative | 2382659 - 2383768 | 41281.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_105268 | Not Available | Negative | 2383854 - 2384444 | 22781.5 |
| arac family transcriptional regulator, regulatory protein of adaptative response / methylated-dna-[protein]-cysteine methyltransferase | SAMN04487898_105269 | Not Available | Positive | 2384821 - 2385669 | 31822.0 |
| hypothetical protein | SAMN04487898_105270 | Not Available | Positive | 2385632 - 2386393 | 29091.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_105271 | Not Available | Negative | 2386430 - 2387017 | 23102.6 |
| fecr family protein | SAMN04487898_105272 | Not Available | Positive | 2387139 - 2388290 | 42957.4 |
| hypothetical protein | SAMN04487898_105273 | Not Available | Positive | 2388416 - 2390233 | 65082.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_105274 | Not Available | Positive | 2390359 - 2393808 | 127239.0 |
| starch-binding associating with outer membrane | SAMN04487898_105275 | Not Available | Positive | 2393819 - 2395678 | 67874.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

