Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine decarboxylase | SAMN04487898_105256 | Not Available | Negative | 2368277 - 2369407 | 42321.8 |
| dna-binding transcriptional regulator, lrp family | SAMN04487898_105257 | Not Available | Positive | 2369558 - 2370025 | 17419.4 |
| alkaline and neutral invertase | SAMN04487898_105258 | Not Available | Negative | 2370027 - 2371187 | 44013.4 |
| glycosyl transferases group 1 | SAMN04487898_105259 | Not Available | Negative | 2371199 - 2372365 | 43272.7 |
| hypothetical protein | SAMN04487898_105260 | Not Available | Negative | 2372338 - 2372994 | 25317.1 |
| hypothetical protein | SAMN04487898_105261 | Not Available | Negative | 2373172 - 2373708 | 19577.8 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_105262 | Not Available | Negative | 2373711 - 2374871 | 44397.7 |
| thioredoxin-like | SAMN04487898_105263 | Not Available | Negative | 2374903 - 2376108 | 44812.8 |
| pregnancy-associated plasma protein-a | SAMN04487898_105264 | Not Available | Negative | 2376111 - 2377415 | 47810.9 |
| starch-binding associating with outer membrane | SAMN04487898_105265 | Not Available | Negative | 2377428 - 2378951 | 56557.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

