Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_105226 | Not Available | Positive | 2330796 - 2331782 | 36917.7 |
| ca-activated chloride channel family protein | SAMN04487898_105227 | Not Available | Positive | 2331769 - 2332773 | 36945.4 |
| ca-activated chloride channel family protein | SAMN04487898_105228 | Not Available | Positive | 2332778 - 2333812 | 38216.7 |
| tpr repeat-containing protein | SAMN04487898_105229 | Not Available | Positive | 2333815 - 2334591 | 30102.2 |
| oxygen tolerance | SAMN04487898_105230 | Not Available | Positive | 2334608 - 2336422 | 65734.3 |
| tpr repeat-containing protein | SAMN04487898_105231 | Not Available | Positive | 2336400 - 2337191 | 29378.2 |
| tigr02453 family protein | SAMN04487898_105232 | Not Available | Positive | 2337205 - 2337906 | 26881.8 |
| hypothetical protein | SAMN04487898_105233 | Not Available | Positive | 2337991 - 2338431 | 16862.1 |
| ost-hth/lotus domain-containing protein | SAMN04487898_105234 | Not Available | Negative | 2338391 - 2339254 | 32037.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_105235 | Not Available | Positive | 2339519 - 2340097 | 22443.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

