Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel domain-containing protein | SAMN04487898_105186 | Not Available | Negative | 2282354 - 2282956 | 21337.3 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN04487898_105187 | Not Available | Positive | 2283334 - 2284851 | 57836.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_105188 | Not Available | Negative | 2284848 - 2287124 | 86291.1 |
| hypothetical protein | SAMN04487898_105189 | Not Available | Positive | 2287490 - 2288848 | 52037.9 |
| hypothetical protein | SAMN04487898_105190 | Not Available | Positive | 2290362 - 2291006 | 23808.1 |
| hypothetical protein | SAMN04487898_105191 | Not Available | Positive | 2291003 - 2292160 | 44176.3 |
| hypothetical protein | SAMN04487898_105192 | Not Available | Positive | 2292144 - 2292755 | 23927.1 |
| hypothetical protein | SAMN04487898_105193 | Not Available | Positive | 2293019 - 2293675 | 24204.2 |
| hypothetical protein | SAMN04487898_105194 | Not Available | Positive | 2293737 - 2294105 | 13930.8 |
| chap domain-containing protein | SAMN04487898_105195 | Not Available | Positive | 2294045 - 2294554 | 18964.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

