Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merc mercury resistance protein | SAMN04487898_105176 | Not Available | Negative | 2271334 - 2271729 | 14321.8 |
| gtpase, g3e family | SAMN04487898_105177 | Not Available | Positive | 2271787 - 2273025 | 46688.9 |
| atpase components of abc transporters with duplicated atpase domains | SAMN04487898_105178 | Not Available | Negative | 2273227 - 2274927 | 64430.6 |
| hypothetical protein | SAMN04487898_105179 | Not Available | Positive | 2274991 - 2275506 | 19796.5 |
| nitroreductase | SAMN04487898_105180 | Not Available | Positive | 2275605 - 2276183 | 21956.4 |
| hypothetical protein | SAMN04487898_105181 | Not Available | Positive | 2276187 - 2276633 | 16489.6 |
| polysaccharide deacetylase | SAMN04487898_105182 | Not Available | Negative | 2276636 - 2277493 | 32557.1 |
| polysaccharide deacetylase | SAMN04487898_105183 | Not Available | Negative | 2277521 - 2278426 | 33866.5 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04487898_105184 | Not Available | Positive | 2278555 - 2281068 | 95594.3 |
| bleomycin hydrolase | SAMN04487898_105185 | Not Available | Negative | 2281118 - 2282224 | 41055.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

