Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_105141 | Not Available | Negative | 2241601 - 2242179 | 22806.6 |
| hypothetical protein | SAMN04487898_105142 | Not Available | Negative | 2242437 - 2242595 | 6301.73 |
| hypothetical protein | SAMN04487898_105143 | Not Available | Negative | 2242644 - 2242805 | 6473.88 |
| hypothetical protein | SAMN04487898_105169 | Not Available | Positive | 2266777 - 2267229 | 17083.6 |
| hypothetical protein | SAMN04487898_105170 | Not Available | Negative | 2267282 - 2267428 | 5966.27 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | SAMN04487898_105171 | Not Available | Positive | 2267849 - 2268349 | 17835.8 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04487898_105172 | Not Available | Negative | 2268353 - 2268772 | 15828.1 |
| hypothetical protein | SAMN04487898_105173 | Not Available | Negative | 2268775 - 2269218 | 16478.6 |
| putative abc transport system permease protein | SAMN04487898_105174 | Not Available | Negative | 2269242 - 2270501 | 45939.5 |
| putative abc transport system atp-binding protein | SAMN04487898_105175 | Not Available | Negative | 2270498 - 2271127 | 22783.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

