Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-alanine-dl-glutamate epimerase | SAMN04487898_105121 | Not Available | Negative | 2228491 - 2229588 | 40528.3 |
| hypothetical protein | SAMN04487898_105122 | Not Available | Positive | 2229672 - 2231693 | 76605.1 |
| site-specific recombinase xerd | SAMN04487898_105123 | Not Available | Positive | 2231876 - 2233072 | 46674.5 |
| hypothetical protein | SAMN04487898_105124 | Not Available | Negative | 2233339 - 2233890 | 21116.3 |
| hypothetical protein | SAMN04487898_105125 | Not Available | Negative | 2233944 - 2234216 | 10432.4 |
| hypothetical protein | SAMN04487898_105126 | Not Available | Negative | 2234550 - 2234825 | 10927.4 |
| hypothetical protein | SAMN04487898_105127 | Not Available | Negative | 2234831 - 2235127 | 11409.6 |
| hypothetical protein | SAMN04487898_105128 | Not Available | Negative | 2235189 - 2235434 | 9607.65 |
| hypothetical protein | SAMN04487898_105129 | Not Available | Positive | 2235780 - 2237222 | 55613.3 |
| hypothetical protein | SAMN04487898_105130 | Not Available | Positive | 2237354 - 2237617 | 10015.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

