Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_105111 | Not Available | Negative | 2213424 - 2217092 | 136441.0 |
| fecr family protein | SAMN04487898_105112 | Not Available | Negative | 2217160 - 2218308 | 43164.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_105113 | Not Available | Negative | 2218411 - 2218998 | 22885.6 |
| hypothetical protein | SAMN04487898_105114 | Not Available | Positive | 2219124 - 2219306 | 6802.17 |
| rna polymerase sigma factor, sigma-70 family | SAMN04487898_105115 | Not Available | Positive | 2219392 - 2220000 | 23583.7 |
| fecr family protein | SAMN04487898_105116 | Not Available | Positive | 2220059 - 2221279 | 45484.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_105117 | Not Available | Positive | 2221430 - 2225014 | 132248.0 |
| susd family protein | SAMN04487898_105118 | Not Available | Positive | 2225032 - 2226444 | 53253.6 |
| protein of unknown function | SAMN04487898_105119 | Not Available | Positive | 2226456 - 2227271 | 30087.8 |
| peroxiredoxin | SAMN04487898_105120 | Not Available | Positive | 2227292 - 2228425 | 41189.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

