Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04487898_105101 | Not Available | Negative | 2198462 - 2199640 | 44035.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_105102 | Not Available | Negative | 2199705 - 2200295 | 22888.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_105103 | Not Available | Positive | 2200506 - 2201096 | 22888.4 |
| fecr family protein | SAMN04487898_105104 | Not Available | Positive | 2201187 - 2202356 | 43361.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_105105 | Not Available | Positive | 2202656 - 2206138 | 130589.0 |
| starch-binding associating with outer membrane | SAMN04487898_105106 | Not Available | Positive | 2206150 - 2208078 | 73551.0 |
| glycosyl hydrolases family 43 | SAMN04487898_105107 | Not Available | Positive | 2208094 - 2209164 | 40866.4 |
| protein of unknown function | SAMN04487898_105108 | Not Available | Negative | 2209241 - 2210560 | 49265.3 |
| substrate import-associated zinc metallohydrolase lipoprotein | SAMN04487898_105109 | Not Available | Negative | 2210566 - 2211894 | 49677.1 |
| susd family protein | SAMN04487898_105110 | Not Available | Negative | 2211936 - 2213411 | 55675.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

