Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_10591 | Not Available | Positive | 2179981 - 2180565 | 22748.6 |
| fecr family protein | SAMN04487898_10592 | Not Available | Positive | 2180675 - 2181679 | 37640.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN04487898_10593 | Not Available | Positive | 2181902 - 2185117 | 120477.0 |
| hypothetical protein | SAMN04487898_10594 | Not Available | Positive | 2185128 - 2186216 | 39841.2 |
| hypothetical protein | SAMN04487898_10595 | Not Available | Negative | 2186471 - 2187358 | 33607.7 |
| muts domain iii | SAMN04487898_10596 | Not Available | Negative | 2187373 - 2190045 | 100717.0 |
| abc-2 type transport system permease protein | SAMN04487898_10597 | Not Available | Negative | 2190050 - 2192350 | 86623.6 |
| abc-2 type transport system atp-binding protein | SAMN04487898_10598 | Not Available | Negative | 2192360 - 2193289 | 34768.0 |
| susd family protein | SAMN04487898_10599 | Not Available | Negative | 2193389 - 2194765 | 52153.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_105100 | Not Available | Negative | 2194784 - 2198347 | 131509.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

