Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-synthase | SAMN04487898_10581 | Not Available | Positive | 2165840 - 2167201 | 50186.3 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN04487898_10582 | Not Available | Negative | 2167291 - 2168616 | 48172.1 |
| protein of unknown function | SAMN04487898_10583 | Not Available | Negative | 2168653 - 2169321 | 25883.8 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN04487898_10584 | Not Available | Negative | 2169531 - 2171843 | 87829.5 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN04487898_10585 | Not Available | Positive | 2172295 - 2173665 | 50371.0 |
| lysozyme | SAMN04487898_10586 | Not Available | Positive | 2173823 - 2174740 | 35470.6 |
| hypothetical protein | SAMN04487898_10587 | Not Available | Positive | 2174791 - 2175342 | 21181.9 |
| mg2+-importing atpase | SAMN04487898_10588 | Not Available | Positive | 2175349 - 2177883 | 93029.2 |
| cardiolipin synthase | SAMN04487898_10589 | Not Available | Negative | 2177880 - 2179331 | 55254.2 |
| Trna-leu | Not Available | Not Available | Positive | 2179490 - 2179576 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

