Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative redox protein | SAMN04487898_10571 | Not Available | Positive | 2154152 - 2154568 | 15300.6 |
| o-succinylhomoserine sulfhydrylase | SAMN04487898_10572 | Not Available | Positive | 2154574 - 2155740 | 42916.3 |
| hypothetical protein | SAMN04487898_10573 | Not Available | Negative | 2155867 - 2156145 | 10502.8 |
| hypothetical protein | SAMN04487898_10574 | Not Available | Negative | 2156148 - 2158958 | 106711.0 |
| eama-like transporter family protein | SAMN04487898_10575 | Not Available | Negative | 2159429 - 2160319 | 33200.6 |
| lipopolysaccharide export system permease protein | SAMN04487898_10576 | Not Available | Negative | 2160319 - 2161422 | 42151.6 |
| queuine trna-ribosyltransferase | SAMN04487898_10577 | Not Available | Negative | 2161423 - 2162553 | 42427.3 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04487898_10578 | Not Available | Positive | 2162730 - 2163875 | 43542.9 |
| 16s rrna (guanine527-n7)-methyltransferase | SAMN04487898_10579 | Not Available | Positive | 2163872 - 2164498 | 23788.6 |
| dna processing protein | SAMN04487898_10580 | Not Available | Positive | 2164596 - 2165687 | 40056.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

