Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ipt/tig domain-containing protein | SAMN04487898_101140 | Not Available | Positive | 199908 - 201272 | 48000.3 |
| dna-binding beta-propeller fold protein ynce | SAMN04487898_101141 | Not Available | Positive | 201298 - 203595 | 82089.5 |
| hypothetical protein | SAMN04487898_101142 | Not Available | Positive | 203665 - 204966 | 48703.7 |
| hexosaminidase | SAMN04487898_101143 | Not Available | Positive | 204999 - 206858 | 69931.9 |
| alpha-l-rhamnosidase n-terminal domain-containing protein | SAMN04487898_101144 | Not Available | Positive | 206887 - 209673 | 104033.0 |
| alpha-l-rhamnosidase | SAMN04487898_101145 | Not Available | Positive | 209683 - 212517 | 106563.0 |
| hypothetical protein | SAMN04487898_101146 | Not Available | Negative | 212600 - 213406 | 28988.4 |
| protein of unknown function | SAMN04487898_101147 | Not Available | Positive | 213583 - 213912 | 11818.3 |
| protein of unknown function | SAMN04487898_101148 | Not Available | Positive | 213928 - 214302 | 14169.8 |
| hypothetical protein | SAMN04487898_101149 | Not Available | Positive | 214311 - 214466 | 5592.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

